Bioinformatics

Prof. Till Rudack (externer Link, ?ffnet neues Fenster)

You have to choose the theoretical module and the practical module.

An overview of accepted courses within the module is available here hyperlink (externer Link, ?ffnet neues Fenster)

For more information contact Prof. Till Rudack (till.rudack(at)ur.de (?ffnet Ihr E-Mail-Programm))

TM Bioinformatics

BIO-M-TM-CB

Detailed module description - pdf (externer Link, ?ffnet neues Fenster)

Person in charge: Prof. Till Rudack (till.rudack(at)ur.de (?ffnet Ihr E-Mail-Programm)).

Module contents
Foundations of machine learning test theory methods of optimization algorithms utilized in computational biology modelling biological objects analysis of large data sets Presentation and discussion of a research based topic from computational biology
Module components
at least two lectures in the field of computational biology (for a selection see the course catalog at the university portal; WS and SS) one seminar in the field of computational biology (for a selection see the course catalog at the university portal; WS and SS). In the seminar a seminar presentation has to be held and registered in Flexnow as an ungraded study achievement (Studienleistung). Note! If you are not sure what lectures and seminar to select, please contact the person in charge of the module. The selection may depend on the examiner you choose for the module examination. For the Theoretical module, bioinformatics lectures and internships from the groups of Prof. Rudack, PD Uwe Schwartz, or Prof. Spang are accepted. Module final exams can be taken by Prof. Rudack, Prof. Spang and Prof. Gronwald.
Module examination
30 min oral examination (graded) Examiner: Prof. Till Rudack (externer Link, ?ffnet neues Fenster) Prof. Wolfram Gronwald (externer Link, ?ffnet neues Fenster) Prof. Dr. Rainer Spang (externer Link, ?ffnet neues Fenster) The student can choose the examiner. Please get in contact with the examiner to arrange a date of the oral examination, than register the examination in flexnow.

PM Sequence- and Structure-based Computational Biology

BIO-M-PM-CB

Detailed module description - pdf (externer Link, ?ffnet neues Fenster)

For more information please contact Dr. Kristina Straub (kristina.straub@ur.de).

Module contents
sequence comparison computation of phylogenetic trees 2D prediction homology modelling protein design visualization of protein 3D structures analysis of omics data sets, presentation and discussion of own computational findings
Module components
Laboratory course (6 weeks) with seminar: Sequence- and structure-based computational biology The laboratory course can be composed of a 3-weeks project course (WS) and a 3-weeks laboratory course. Laboratory courses are acceptet from following groups: Prof. Till Rudack (link to the group(externer Link, ?ffnet neues Fenster) (externer Link, ?ffnet neues Fenster)) Prof. Rainer Spang (link to the group(externer Link, ?ffnet neues Fenster) (externer Link, ?ffnet neues Fenster)) Prof. Wolfram Gronwald (link to the group(externer Link, ?ffnet neues Fenster) (externer Link, ?ffnet neues Fenster)) For more information contact Prof. Till Rudack (till.rudack?(at)?ur.de(?ffnet Ihr E-Mail-Programm) (externer Link, ?ffnet neues Fenster))
Module examination
Portfolio examination (graded)

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